.

Some works using TREEFINDER:

1. Abby SS, Tannier E, Gouy M, Daubin V. Detecting lateral gene transfers by statistical reconciliation of phylogenetic forests. 2010. BMC Bioinformatics 11(1):324.
2. Aikawa T, Anbutsu H, Nikoh N, Kikuchi T, Shibata F, Fukatsu T. Longicorn beetle that vectors pinewood nematode carries many Wolbachia genes on an autosome. 2009. Proc. Biol. Sci. 276(1674):3791-3798.
3. Aleshin VV, Mikhailov KV, Konstantinova AV, Nikitin MA, Rusin LY, Buinova DA, Kedrova OS, Petrov NB. On the phylogenetic position of insects in the Pancrustacea clade. 2009. Molecular Biology 43(5):866-881.
4. Allegrucci G, Rampini M, Gratton P, Todisco V, Sbordoni V. Testing phylogenetic hypotheses for reconstructing the evolutionary history of Dolichopoda cave crickets in the eastern Mediterranean. 2009. Journal of Biogeography 36(9):1785-1797.
5. Alstrom P, Davidson P, Duckworth JW, Eames JC, Le TT, Nguyen C, Olsson U, Robson C, Timmins R. Description of a new species of Phylloscopus warbler from Vietnam and Laos. 2009. Ibis 152(1):145-168.
6. Alstrom P, Olsson U, Lei F, Wang HT, Gao W, Sundberg P. Phylogeny and classification of the Old World Emberizini (Aves, Passeriformes). 2008. Mol. Phylogenet. Evol. 47(3):960-973.
7. Alvarez N, Benrey B, Hossaert-McKey M, Grill A, McKey D, Galtier N. Phylogeographic support for horizontal gene transfer involving sympatric bruchid species. 2006. Biol. Direct 1:21.
8. Andreone F, Rosa GM, Noel J, Crottini A, Vences M, Raxworthy CJ. Living within fallen palm leaves: the discovery of an unknown Blommersia (Mantellidae: Anura) reveals a new reproductive strategy in the amphibians of Madagascar. 2010. Naturwissenschaften 97(6):525-543.
9. Angelici FM, Cabras PA, Trucchi E. Records of crested porcupine, Hystrix cristata, in Sardinia. 2009. Mammalia 73(4):377-379.
10. Anisimova M, Kosiol C. Investigating protein-coding sequence evolution with probabilistic codon substitution models. 2008. Mol. Biol. Evol. 26(2):255-271.
11. Antonini G, Coletti G, Serrani L, Tronci C, Cristofaro M, Smith L. Using molecular genetics to identify immature specimens of the weevil Ceratapion basicorne (Coleoptera: Apionidae). 2009. Biological Control 51(1):152-157.
12. Arp G, Bissett A, Brinkmann N, Cousin S, de Beer D, Friedl T, Mohr KI, Neu TR, Reimer A, Shiraishi F, Stackebrandt E, Zippel B. Tufa-forming biofilms of German karstwater streams: microorganisms, exopolymers, hydrochemistry and calcification. 2010. Geological Society, London, Special Publications 336:83-118.
13. Audisio P, Brustel H, Carpaneto GM, Coletti G, Mancini E, Trizzino M, Antonini G, DeBiase A. Data on molecular taxonomy and genetic diversification of the European Hermit beetles, a species complex of endangered insects (Coleoptera: Scarabaeidae, Cetoniinae, Osmoderma). 2009. J. Zool. Syst. Evol. Res. 47(1):88-95.
14. Audisio P, Trizzino M, De Biase A, Rossetti G, Mancini E, Antonini G. Molecular and morphological evidence of a new sibling species of Calobius (Coleoptera: Hydraenidae) of the C. quadricollis complex from peninsular Italy. 2010. Italian Journal of Zoology 77(1):29-37.
15. Audzijonyte A, Daneliya ME, Vainola R. Comparative phylogeography of Ponto-Caspian mysid crustaceans: isolation and exchange among dynamic inland sea basins. 2006. Molecular Ecology 15(10):2969–2984.
16. Badali H, Carvalho VO, Vicente V, Attili-Angelis D, Kwiatkowski IB, Gerrits Van Den Ende AH, De Hoog GS. Cladophialophora saturnica sp. nov., a new opportunistic species of Chaetothyriales revealed using molecular data. 2008. Med. Mycol. 47(1):51-62.
17. Baeza JA, Bolanos JA, Hernandez JE, Lopez R. A new species of Lysmata (Crustacea, Decapoda, Hippolytidae) from Venezuela, southeastern Caribbean Sea. 2009. Zootaxa 2240:60-68.
18. Bannikova AA, Lebedev VS, Lissovsky AA, Matrosova V, Abramson NI, Obolenskaya EV, Tesakov AS. Molecular phylogeny and evolution of the Asian lineage of vole genus Microtus (Rodentia: Arvicolinae) inferred from mitochondrial cytochrome b sequence. 2010. Biol. J. Linnean Society 99(3):595-613.
19. Barco A, Claremont M, Reid DG, Houart R, Bouchet P, Williams ST, Cruaud C, Couloux A, Oliverio M. A molecular phylogenetic framework for the Muricidae, a diverse family of carnivorous gastropods. 2010. Mol. Phylogenet. Evol. 56(3):1025-1039.
20. Bataille A, Cunningham AA, Cedeno V, Patino L, Constantinou A, Kramer LD, Goodman SJ. Natural colonization and adaptation of a mosquito species in Galapagos and its implications for disease threats to endemic wildlife. 2009. Proc. Natl. Acad. Sci. USA 106(25):10230-10235.
21. Baum BR, Johnson DA, Bailey GL. Ancient differentiation of the H and I haplomes in diploid Hordeum species based on 5S rDNA. 2005. Genome 48(4):610-618.
22. Baurain D, Brinkmann H, Petersen J, Rodriguez-Ezpeleta N, Stechmann A, Demoulin V, Roger AJ, Burger G, Lang BF, Philippe H. Phylogenomic evidence for separate acquisition of plastids in cryptophytes, haptophytes and stramenopiles. 2010. Mol. Biol. Evol. 27(7):1698-1709.
23. Baurain D, Brinkmann H, Philippe H. Lack of resolution in the animal phylogeny: closely spaced cladogeneses or undetected systematic errors? 2007. Mol. Biol. Evol. 24(1):6-9.
24. Belinky F, Rot C, Ilan M, Huchon D. The complete mitochondrial genome of the demosponge Negombata magnifica (Poecilosclerida). 2008. Mol. Phylogenet. Evol. 47(3):1238-1243.
25. Benzerara K, Chapon V, Moreira D, Lopez-Garcia P, Guyot F, Heulin T. Microbial diversity on the Tatahouine meteorite. 2006. Meteoritics and Planetary Science 41(8):1249–1265.
26. Biggs JS, Watkins M, Puillandre N, Ownby JP, Lopez-Vera E, Christensen S, Moreno KJ, Bernaldez J, Licea-Navarro A, Corneli PS, Olivera BM. Evolution of Conus peptide toxins: Analysis of Conus californicus Reeve, 1844. 2010. Mol. Phylogenet. Evol. 56(1):1-12.
27. Blanga-Kanfi S, Miranda H, Penn O, Pupko T, DeBry RW, Huchon D. Rodent phylogeny revised: analysis of six nuclear genes from all major rodent clades. 2009. BMC Evol. Biol. 9:71.
28. Blank M, Bastrop R. Phylogeny of the mud worm genus Marenzelleria (Polychaeta, Spionidae) inferred from mitochondrial DNA sequences. 2009. Zoologica Scripta 38(3):313-321.
29. Blank M, Jurss K, Bastrop R. A mitochondrial multigene approach contributing to the systematics of the brook and river lampreys and the phylogenetic position of Eudontomyzon mariae. 2008. Canadian Journal of Fisheries and Aquatic Sciences 65(12):2780-2790.
30. Bodyl A, Mackiewicz P, Stiller JW. Comparative genomic studies suggest that the cyanobacterial endosymbionts of the amoeba Paulinella chromatophora possess an import apparatus for nuclear-encoded proteins. 2009. Plant Biology 0(0):???-???.
31. Bologna MA, Oliverio M, Pitzalis M, Mariottini P. Phylogeny and evolutionary history of the blister beetles (Coleoptera, Meloidae). 2008. Mol. Phylogenet. Evol. 48(2):679-693.
32. Bondre VP, Sapkal GN, Yergolkar PN, Fulmali PV, Sankararaman V, Ayachit VM, Mishra AC, Gore MM. Genetic characterization of Bagaza virus (BAGV) isolated in India and evidence of anti-BAGV antibodies in sera collected from encephalitis patients. 2009. J. Gen. Virol. 90(Pt 11):2644-2649.
33. Borden WC, Krebs RA. Phylogeography and postglacial dispersal of smallmouth bass (Micropterus dolomieu) into the Great Lakes. 2009. Can. J. Fish. Aquat. Sci. 66(12):2142-2156.
34. Bourlat SJ, Juliusdottir T, Lowe CJ, Freeman R, Aronowicz J, Kirschner M, Lander ES, Thorndyke M, Nakano H, Kohn AB, Heyland A, Moroz LL, Copley RR, Telford MJ. Deuterostome phylogeny reveals monophyletic chordates and the new phylum Xenoturbellida. 2006. Nature 444:85-88.
35. Boyer M, Gimenez G, Suzan-Monti M, Raoult D. Classification and determination of possible origins of ORFans through analysis of nucleocytoplasmic large DNA viruses. 2010. Intervirology 53:310-320.
36. Boyer M, Yutin N, Pagnier I, Barrassi L, Fournous G, Espinosa L, Robert C, Azza S, Sun S, Rossmann MG, Suzan-Monti M, La Scola B, Koonin EV, Raoult D. Giant Marseillevirus highlights the role of amoebae as a melting pot in emergence of chimeric microorganisms. 2009. Proc. Natl. Acad. Sci. USA 106(51):21848-21853.
37. Braband A, Cameron SL, Podsiadlowski L, Daniels SR, Mayer G. The mitochondrial genome of the onychophoran Opisthopatus cinctipes (Peripatopsidae) reflects the ancestral mitochondrial gene arrangement of Panarthropoda and Ecdysozoa. 2010. Mol. Phylogenet. Evol. 0(0):???-???.
38. Bradley ME, Rest JS, Li WH, Schwartz NB. Sulfate activation enzymes: phylogeny and association with pyrophosphatase. 2009. J. Mol. Evol. 68(1):1-13.
39. Brandao SN, Sauer J, Schon I. Circumantarctic distribution in Southern Ocean benthos? A genetic test using the genus Macroscapha (Crustacea, Ostracoda) as a model. 2010. Mol. Phylogenet. Evol. 55(3):1055-1069.
40. Briee C, Moreira D, Lopez-Garcia P. Archaeal and bacterial community composition of sediment and plankton from a suboxic freshwater pond. 2007. Res. Microbiol. 158(3):213-227.
41. Brindefalk B, Viklund J, Larsson D, Thollesson M, Andersson SG. Origin and evolution of the mitochondrial aminoacyl-tRNA synthetases. 2007. Mol. Biol. Evol. 24(3):743-756.
42. Brinkmann H, Philippe H. Animal phylogeny and large-scale sequencing: progress and pitfalls. 2008. J. Syst. Evol. 46(3):274–286.
43. Brouard JS, Otis C, Lemieux C, Turmel M. The exceptionally large chloroplast genome of the green alga Floydiella terrestris illuminates the evolutionary history of the Chlorophyceae. 2010. Genome Biol. Evol. 2:240-256.
44. Brown DM, Brenneman RA, Koepfli KP, Pollinger JP, Mila B, Georgiadis NJ, Louis EE, Grether GF, Jacobs DK, Wayne RK. Extensive population genetic structure in the giraffe. 2007. BMC Biology 5:57.
45. Burki F, Inagaki Y, Brate J, Archibald JM, Keeling PJ, Cavalier-Smith T, Sakaguchi M, Hashimoto T, Horak A, Kumar S, Klaveness D, Jakobsen KS, Pawlowski J, Shalchian-Tabrizi K. Large-scale phylogenomic analyses reveal that two enigmatic protist lineages, Telonemia and Centroheliozoa, are related to photosynthetic Chromalveolates. 2009. Gen. Biol. Evol. 2009:231-238.
46. Burki F, Pawlowski J. Monophyly of rhizaria and multigene phylogeny of unicellular bikonts. 2006. Mol. Biol. Evol. 23(10):1922-1930.
47. Burki F, Shalchian-Tabrizi K, Minge M, Skjaeveland A, Nikolaev SI, Jakobsen KS, Pawlowski J. Phylogenomics reshuffles the eukaryotic supergroups. 2007. PLoS ONE 2(8):e790.
48. Burki F, Shalchian-Tabrizi K, Pawlowski J. Phylogenomics reveals a new 'megagroup' including most photosynthetic eukaryotes. 2008. Biol. Lett. 4(4):366-369.
49. Buschiazzo E, Gemmell NJ. Evolutionary and phylogenetic significance of platypus microsatellites conserved in mammalian and other vertebrate genomes. 2009. Australian Journal of Zoology 57(4):175-184.
50. Caikovski M, Yokthongwattana C, Habu Y, Nishimura T, Mathieu O, Paszkowski J. Divergent evolution of CHD3 proteins resulted in MOM1 refining epigenetic control in vascular plants. 2008. PLoS Genet. 4(8):e1000165.
51. Calderon I, Turon X, Lessios HA. Characterization of the sperm molecule bindin in the sea urchin genus Paracentrotus. 2009. J. Mol. Evol. 68(4):366-376.
52. Calderon I, Ventura CR, Turon X, Lessios HA. Genetic divergence and assortative mating between colour morphs of the sea urchin Paracentrotus gaimardi. 2010. Mol. Ecol. 19(3):484-493.
53. Calenda G, Peng J, Redman CM, Sha Q, Wu X, Lee S. Identification of two new members, XPLAC and XTES, of the XK family. 2006. Gene 370:6-16.
54. Calvo M, Templado J, Oliverio M, Machordom A. Hidden Mediterranean biodiversity: molecular evidence for a cryptic species complex within the reef building vermetid gastropod Dendropoma petraeum (Mollusca: Caenogastropoda). 2009. Biological Journal of the Linnean Society 96(4):898-912.
55. Cardoso YP, Montoya-Burgos JI. Unexpected diversity in the catfish Pseudancistrus brevispinis reveals dispersal routes in a Neotropical center of endemism: the Guyanas Region. 2009. Molecular Ecology 18(5):947-964.
56. Caspersen CS, Reznik B, Weldy PL, Abildskov KM, Stark RI, Garland M. Molecular cloning of the baboon UDP-glucuronosyltransferase 1A gene family: Evolution of the primate UGT1 locus and relevance for models of human drug metabolism. 2007. Pharmacogenetics and Genomics 17(1):11-24.
57. Cavalier-Smith T, Chao EE, Stechmann A, Oates B, Nikolaev S. Planomonadida ord. nov. (Apusozoa): ultrastructural affinity with Micronuclearia podoventralis and deep divergences within Planomonas gen. nov.. 2008. Protist 159(4):535-562.
58. Cavalier-Smith T, Lewis R, Chao EE, Oates B, Bass D. Morphology and phylogeny of Sainouron acronematica sp. n. and the ultrastructural unity of Cercozoa. 2008. Protist 159(4):591-620.
59. Cech G, Csuzdi C, Marialigeti K. Remarks on the molecular phylogeny of the genus Dendrobaena (sensu Pop 1941) based on the investigation of 18S rDNA sequences. 2006. Advances in Earthworm Taxonomy II, Univ. Press, Cluj, pp. 85-98.
60. Charlat S, Duplouy A, Hornett EA, Dyson EA, Davies N, Roderick GK, Wedell N, Hurst GD. The joint evolutionary histories of Wolbachia and mitochondria in Hypolimnas bolina. 2009. BMC Evol. Biol. 9:64.
61. Cherian SS, Walimbe AM, Jadhav SM, Gandhe SS, Hundekar SL, Mishra AC, Arankalle VA. Evolutionary rates and timescale comparison of Chikungunya viruses inferred from the whole genome/E1 gene with special reference to the 2005-07 outbreak in the Indian subcontinent. 2009. Infect. Genet. Evol. 9(1):16-23.
62. Chiachio MC, Oliveira C, Montoya-Burgos JI. Molecular systematic and historical biogeography of the armored Neotropical catfishes Hypoptopomatinae and Neoplecostominae (Siluriformes: Loricariidae). 2008. Mol. Phylogenet. Evol. 49(2):606-617.
63. Cocquyt E, Verbruggen H, Leliaert F, Zechman FW, Sabbe K, De Clerck O. Gain and loss of elongation factor genes in green algae. 2009. BMC Evol. Biol. 9(1):39.
64. Colleoni C, Linka M, Deschamps P, Handford MG, Dupree P, Weber AP, Ball SG. Phylogenetic and biochemical evidence supports the recruitment of an ADP-glucose translocator for the export of photosynthate during plastid endosymbiosis. 2010. Mol. Biol. Evol. 0(0):???-???.
65. Collins RA. Borna disease virus and mental illness. 2004. The Biomedical Scientist, November 2004.
66. Corsaro D, Michel R, Walochnik J, Müller KD, Greub G. Saccamoeba lacustris, sp. nov. (Amoebozoa: Lobosea: Hartmannellidae), a new lobose amoeba, parasitized by the novel chlamydia 'Candidatus Metachlamydia lacustris' (Chlamydiae: Parachlamydiaceae). 2010. Eur. J. Protistol. 46(2):86-95.
67. Corsaro D, Venditti D. Detection of Chlamydiae from freshwater environments by PCR, amoeba coculture and mixed coculture. 2009. Research in Microbiology 160(8):547-552.
68. Corsaro D, Venditti D. Phylogenetic evidence for a new genotype of Acanthamoeba (Amoebozoa, Acanthamoebida). 2010. Parasitol. Res. 0(0):???-???.
69. Crone EJ, Zera AJ, Anand A, Oakeshott JG, Sutherland TD, Russell RJ, Harshman LG, Hoffmann FG, Claudianos C. Jhe in Gryllus assimilis: cloning, sequence-activity associations and phylogeny. 2007. Insect Biochem. Mol. Biol. 37(12):1359-1365.
70. Crosbie ND, Pockl M, Weisse T. Dispersal and phylogenetic diversity of nonmarine picocyanobacteria, inferred from 16S rRNA gene and cpcBA-intergenic spacer sequence analyses. 2003. Appl. Environ. Microbiol. 69(9):5716-5721.
71. Crottini A, Dordel J, Kohler J, Glaw F, Schmitz A, Vences M. A multilocus phylogeny of Malagasy scincid lizards elucidates the relationships of the fossorial genera Androngo and Cryptoscincus. 2009. Mol. Phylogenet. Evol. 53(1):345-350.
72. Dabert M, Witalinski W, Kazmierski A, Olszanowski Z, Dabert J. Molecular phylogeny of acariform mites (Acari, Arachnida): Strong conflict between phylogenetic signal and long-branch attraction artifacts. 2010. Mol. Phylogenet. Evol. 56(1):222-241.
73. DaCosta JM, Klicka J. The Great American Interchange in birds: a phylogenetic perspective with the genus Trogon. 2008. Molecular Ecology 17(5):1328–1343.
74. DaCosta JM, Spellman GM, Escalante P, Klicka J. A molecular systematic revision of two historically problematic songbird clades: Aimophila and Pipilo. 2009. Journal of Avian Biology 40(2):206-216.
75. Daza JM, Smith EN, Paez VP, Parkinson CL. Complex evolution in the Neotropics: The origin and diversification of the widespread genus Leptodeira (Serpentes: Colubridae). 2009. Mol. Phylogenet. Evol. 53(3):653-667.
76. de Farias ST, Guimaraes RC. Aminoacyl-tRNA synthetase classes and groups in prokaryotes. 2008. J. Theor. Biol. 250(2):221-229.
77. Delaney KS, Zafar S, Wayne RK. Genetic divergence and differentiation within the western scrub-jay (Aphelocoma californica). 2008. The Auk 125(4):839-849.
78. Del Castillo H, Vernot JP. Characterizing the CD3 epsilon chain from the New World primate Aotus nancymaae. Biomedica 28(2):262-270.
79. Delsuc F, Brinkmann H, Chourrout D, Philippe H. Tunicates and not cephalochordates are the closest living relatives of vertebrates. 2006. Nature 439:965–968.
80. Delsuc F, Tsagkogeorga G, Lartillot N, Philippe H. Additional molecular support for the new chordate phylogeny. 2008. Genesis 46(11):592-604.
81. Demma LJ, Vanderford TH, Logsdon JM Jr, Feinberg MB, Staprans SI. Evolution of the uniquely adaptable lentiviral envelope in a natural reservoir host. 2006. Retrovirology 3:19.
82. Demma LJ, Logsdon JM Jr, Vanderford TH, Feinberg MB, Staprans SI. SIVsm quasispecies adaptation to a new simian host. 2005. PLoS Pathog. 1(1):e3.
83. Demonchy R, Blisnick T, Deprez C, Toutirais G, Loussert C, Marande W, Grellier P, Bastin P, Kohl L. Kinesin 9 family members perform separate functions in the trypanosome flagellum. 2009. J. Cell Biol. 187(5):615-622.
84. Deng S, Bulmer GS, Summerbell RC, De Hoog GS, Hui Y, Graser Y. Changes in frequency of agents of tinea capitis in school children from Western China suggest slow migration rates in dermatophytes. 2008. Med. Mycol. 46(5):421-427.
85. Dermauw W, Vanholme B, Tirry L, Van Leeuwen T. Mitochondrial genome analysis of the predatory mite Phytoseiulus persimilis and a revisit of the Metaseiulus occidentalis mitochondrial genome. 2010. Genome 53(4):285-301.
86. Dermauw W, Van Leeuwen T, Vanholme B, Tirry L. The complete mitochondrial genome of the house dust mite, Dermatophagoides pteronyssinus (Trouessart): a novel gene arrangement among arthropods. 2009. BMC Genomics 10:107.
87. Deschamps P, Moreira D. Signal conflicts in the phylogeny of the primary photosynthetic eukaryotes. 2009. Mol. Biol. Evol. 26(12):2745-2753.
88. Devier B, Aguileta G, Hood ME, Giraud T. Ancient trans-specific polymorphism at pheromone receptor genes in Basidiomycetes. 2009. Genetics 181(1):209-223.
89. Diavatopoulos DA, Hijnen M, Mooi FR. Adaptive evolution of the Bordetella autotransporter pertactin. 2006. J. Evol. Biol. 19(6):1931-1938.
90. Dimitrov D, Arnedo MA, Ribera C. Colonization and diversification of the spider genus Pholcus Walckenaer, 1805 (Araneae, Pholcidae) in the Macaronesian archipelagos: evidence for long-term occupancy yet rapid recent speciation. 2008. Mol. Phylogenet. Evol. 48(2):596-614.
91. Domingo-Roura X, Lopez-Giraldez F, Saeki M, Marmi J. Phylogenetic inference and comparative evolution of a complex microsatellite and its flanking regions in carnivores. 2005. Genet. Res. 85(3):223-233.
92. Dordel J, Fisse F, Purschke G, Struck TH. Phylogenetic position of Sipuncula derived from multi-gene and phylogenomic data and its implication for the evolution of segmentation. 2010. J. Zool. Syst. Evol. Res. 48(3):197-207.
93. Douglas DA. The molecular evolution of snakes as revealed by mitogenomic data. 2008. Dissertation, Lund University.
94. Douglas DA, Arnason U. Examining the utility of categorical models and alleviating artifacts in phylogenetic reconstruction of the Squamata (Reptilia). 2009. Mol. Phylogenet. Evol. 52(3):784-796.
95. Douglas DA, Gower DJ. Snake mitochondrial genomes: phylogenetic relationships and implications of extended taxon sampling for interpretations of mitogenomic evolution. 2010. BMC Genomics 11:14.
96. Douglas DA, Janke A, Arnason U. A mitogenomic study on the phylogenetic position of snakes. 2006. Zoologica Scripta 35(6):545-558.
97. Duperron S. Symbioses bacteriennes de bivalves mytilides associes aux sources de fluides en domaine oceanique profond : diversite, role nutritionnel et influence de l'environnement. 2005. These, Universite Paris 6.
98. Duperron S, Bergin C, Zielinski F, Blazejak A, Pernthaler A, McKiness ZP, DeChaine E, Cavanaugh CM, Dubilier N. A dual symbiosis shared by two mussel species, Bathymodiolus azoricus and Bathymodiolus puteoserpentis (Bivalvia: Mytilidae), from hydrothermal vents along the northern Mid-Atlantic Ridge. 2006. Environ. Microbiol. 8(8):1441-1447.
99. Duperron S, Fiala-Medioni A, Caprais JC, Olu K, Sibuet M. Evidence for chemoautotrophic symbiosis in a Mediterranean cold seep clam (Bivalvia: Lucinidae): comparative sequence analysis of bacterial 16S rRNA, APS reductase and RubisCO genes. 2006. FEMS Microbiology Ecology 59(1):64.
100. Duperron S, Nadalig T, Caprais JC, Sibuet M, Fiala-Medioni A, Amann R, Dubilier N. Dual symbiosis in a Bathymodiolus sp. mussel from a methane seep on the Gabon continental margin (Southeast Atlantic): 16S rRNA phylogeny and distribution of the symbionts in gills. 2005. Appl. Environ. Microbiol. 71(4):1694-1700.
101. Duperron S, Sibuet M, MacGregor BJ, Kuypers MMM, Fisher CR, Dubilier N. Diversity, relative abundance and metabolic potential of bacterial endosymbionts in three Bathymodiolus mussel species from cold seeps in the Gulf of Mexico. 2007. Environ. Microbiol. 9(6):1423–1438.
102. El Alaoui W. Estimation des longueurs de branche et artefact sur la datation moleculaire. 2009. Dissertation, Universite de Montreal.
103. Elkins JG, Podar M, Graham DE, Makarova KS, Wolf Y, Randau L, Hedlund BP, Brochier-Armanet C, Kunin V, Anderson I, Lapidus A, Goltsman E, Barry K, Koonin EV, Hugenholtz P, Kyrpides N, Wanner G, Richardson P, Keller M, Stetter KO. A korarchaeal genome reveals insights into the evolution of the Archaea. 2008. Proc. Natl. Acad. Sci. USA 105(23):8102-8107.
104. Emerson D, Rentz JA, Lilburn TG, Davis RE, Aldrich H, Chan C, Moyer CL. A novel lineage of proteobacteria involved in formation of marine Fe-oxidizing microbial mat communities. 2007. PLoS ONE 2(8):e667.
105. Escalante P, Marquez-Valdelamar L, de la Torre P, Laclette JP, Klicka J. Evolutionary history of a prominent North American warbler clade: The Oporornis–Geothlypis complex. 2009. Mol. Phylogenet. Evol. 53(3):668-678.
106. Eschholz TW. Genetic diversity and relationships of Swiss Flint maize (Zea mays L. ssp. mays) landraces. 2008. Dissertation, ETH Zurich.
107. Evans KM, Chepurnov VA, Sluiman HJ, Thomas SJ, Spears BM, Mann DG. Highly differentiated populations of the freshwater diatom Sellaphora capitata suggest limited dispersal and opportunities for allopatric speciation. 2009. Protist 0(0):???-???.
108. Evans KM, Wortley AH, Simpson GE, Chepurnov VA, Mann DG. A molecular systematic approach to explore diversity within the Sellaphora pupula species complex (Bacillariophyta). 2008. J. Phycol. 44(1):215–231.
109. Fahrein K, Masta SE, Podsiadlowski L. The first complete mitochondrial genome sequences of Amblypygi (Chelicerata: Arachnida) reveal conservation of the ancestral arthropod gene order. 2009. Genome 52(5):456-466.
110. Fahrein K, Talarico G, Braband A, Podsiadlowski L. The complete mitochondrial genome of Pseudocellus pearsei (Chelicerata: Ricinulei) and a comparison of mitochondrial gene rearrangements in Arachnida. 2007. BMC Genomics 8(1):386.
111. Farias IP, Hrbek T. Patterns of diversification in the discus fishes (Symphysodon spp. Cichlidae) of the Amazon basin. 2008. Mol. Phylogenet. Evol. 49(1):32-43.
112. Farias IP, Torrico JP, Garcia-Davila C, Santos MD, Hrbek T, Renno JF. Are rapids a barrier for floodplain fishes of the Amazon basin? A demographic study of the keystone floodplain species Colossoma macropomum (Teleostei: Characiformes). 2010. Mol. Phylogenet. Evol. 56(3):1129-1135.
113. Ferraresso S, Kuhl H, Milan M, Ritchie DW, Secombes CJ, Reinhardt R, Bargelloni L. Identification and characterisation of a novel immune-type receptor (NITR) gene cluster in the European sea bass, Dicentrarchus labrax, reveals recurrent gene expansion and diversification by positive selection. 2009. Immunogenetics 61(11-12):773-788.
114. Fiore-Donno AM, Haskins E, Pawlowski J, Cavalier-Smith T. Semimorula liquescens is a modified echinostelid myxomycete (Mycetozoa). 2009. Mycologia 101(6):773-776.
115. Fiore-Donno AM, Kamono A, Chao EE, Fukui M, Cavalier-Smith T. Invalidation of Hyperamoeba by transferring its species to other genera of Myxogastria. 2010. J. Eukaryotic Microbiology 57(2):189-196.
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Some works citing my inventions:

1. Ahmed MR, Faizal M, Prasad K, Cho YJ, Kim CG, Lee YH. Exploiting the orbital motion of water particles for energy extraction from waves. 2010. Journal of Mechanical Science and Technology 24(4): 943-949.
2. Faizal M, Ahmed MR, Lee YH. On utilizing the orbital motion in water waves to drive a Savonius rotor. 2010. Renewable Energy 35(1):164-169
3. Zullah MA, Prasad D, Ahmed MR, Lee YH. Performance analysis of a wave energy converter using numerical simulation technique. 2010. Sci. China Tech. Sci. 53(1):13-18.

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Many Thanks! - But having an income would be nice, too ...

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